Author

D. Kozakov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2

Signature Assays, Organisms & Methods

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Approach:mechanistic / dynamical model· 2 Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Approach:deep learning· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1 Research Focus:protein structure prediction· 1 Approach:statistical model· 1

Frequent Co-Authors

A. Alekseenko· 1 shared I. Kolossvary· 1 shared j. Wang· 1 shared M. Sahin-Toth· 1 shared S. Vajda· 1 shared Y. Miao· 1 shared Z. Sun· 1 shared

Activity by Year

2019-2020 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 9 mutual co-author links

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1 shared paperBiophysics

A. Alekseenko

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2 papers

Recent·Most cited

The N34S mutation of SPINK1 may impact the kinetics of trypsinogen activation to cause early trypsin release in the pancreas

Z. Sun, I. Kolossvary, D. Kozakov, M. Sahin-Toth, S. Vajda

The paper shows that the N34S mutation in SPINK1 reduces its inhibitory efficiency, leading to earlier trypsin release in the pancreas due to kinetic effects and autocatalytic conversion.

bioRxiv · Aug 21, 2020 · PreprintBiophysics

Improved Modeling of Peptide-Protein Binding through Global Docking and Accelerated Molecular Dynamics Simulations

j. Wang, A. Alekseenko, D. Kozakov, Y. Miao

The paper presents a method combining global peptide docking and accelerated molecular dynamics simulations to improve peptide-protein binding predictions, achieving high-quality models for some cases.

bioRxiv · Aug 24, 2019Biophysics