Author

D. Ryan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Research Focus:chromatin & epigenetic regulation· 2 Organism:Arabidopsis· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:mouse· 1

Frequent Co-Authors

A. J. Westermann· 2 shared S. Reichardt· 2 shared A. Mogre· 1 shared A. S. Ershova· 1 shared A. Shaibah· 1 shared A. van Oijen· 1 shared A.-S. Ruttiger· 1 shared B. P. Paudel· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersMicrobiology

A. J. Westermann

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

The RNA-binding protein RbpB is a central regulator of polysaccharide utilization in gut Bacteroides

A.-S. Ruttiger, D. Ryan, L. Spiga, V. Lamm-Schmidt, G. Prezza, S. Reichardt, L. Barquist, F. Faber, W. Zhu, A. J. Westermann

This study identifies RbpB as a key RNA-binding protein regulating polysaccharide utilization in gut Bacteroides through post-transcriptional control of PULs.

bioRxiv · Dec 22, 2023 · PreprintMicrobiology

Global analysis of the RNA-RNA interactome in Acinetobacter baumannii AB5075 uncovers a small regulatory RNA repressing the virulence-related outer membrane protein CarO

F. J. Hamrock, D. Ryan, A. Shaibah, A. S. Ershova, A. Mogre, M. M. Sulimani, S. Reichardt, K. Hokamp, A. J. Westermann, C. Kröger

The paper identifies a small regulatory RNA, Aar, that represses virulence-related genes in A. baumannii through antisense base-pairing, revealing sRNA-mediated gene regulation in this pathogen.

bioRxiv · Dec 4, 2023Microbiology

CHD4 slides nucleosomes by decoupling entry- and exit-side DNA translocation

Y. Zhong, B. P. Paudel, D. Ryan, J. Low, C. Franck, K. Patel, M. Benward, R. Payne, A. van Oijen, J. Mackay

This study investigates the mechanism of CHD4-mediated nucleosome sliding using single-molecule assays, revealing a decoupling of DNA translocation at entry and exit sides.

bioRxiv · Jun 27, 2019Biochemistry