Author

D. Tullman-Ercek

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 3 Biochemistry· 1 Biophysics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:bacteria (other)· 4 Approach:experimental assay· 4 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:electronic health records· 1

Frequent Co-Authors

N. W. Kennedy· 3 shared C. E. Mills· 2 shared M. B. Francis· 2 shared M. Olvera de la Cruz· 2 shared A. D. Jackson· 1 shared A. G. Archer· 1 shared B. C. Ikwuagwu· 1 shared B. Ikwuagwu· 1 shared

Activity by Year

2020-2023 · peak 4/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioengineering

N. W. Kennedy

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Systematic Engineering of Virus-Like Particles to Identify Self-Assembly Rules for Shifting Particle Size

B. Ikwuagwu, E. Hartman, C. Mills, D. Tullman-Ercek

The paper systematically engineers virus-like particles to identify self-assembly rules that control particle size by mutating key residues in coat proteins and analyzing the effects.

Virology · Feb 1, 2023Peer-reviewedBioengineering

Comprehensive Fitness Landscape of a Multi-Geometry Protein Capsid Informs Machine Learning Models of Assembly

D. D. Brauer, C. B. Santiago, Z. N. Merz, E. McCarthy, D. Tullman-Ercek, M. B. Francis

The paper generates fitness landscapes for two VLP capsid geometries and uses them to train machine learning models for predicting mutational effects on assembly.

bioRxiv · Dec 21, 2021 · PreprintBioengineering

Vertex protein PduN tunes encapsulated pathway performance by dictating bacterial metabolosome morphology

C. E. Mills, C. Waltmann, A. G. Archer, N. W. Kennedy, C. H. Abrahamson, A. D. Jackson, E. W. Roth, S. Shirman, M. C. Jewett, N. M. Mangan, M. Olvera de la Cruz, D. Tullman-Ercek

The paper investigates how removing the vertex protein PduN alters the morphology of the Pdu MCP microcompartment in Salmonella, affecting pathway performance through changes in surface area to volume ratios.

bioRxiv · Oct 31, 2021Bioengineering

Computational and experimental approaches to controlling bacterial microcompartment assembly

Y. Li, N. W. Kennedy, S. Li, C. E. Mills, D. Tullman-Ercek, M. Olvera de la Cruz

The paper uses computational and experimental methods to control bacterial microcompartment assembly by modifying protein interactions and angles.

bioRxiv · Jan 18, 2021Biophysics

Self-assembling shell proteins PduA and PduJ have essential and redundant roles in bacterial microcompartment assembly

N. W. Kennedy, S. P. Ikonomova, M. Slininger Lee, H. W. Raeder, D. Tullman-Ercek

The paper investigates the roles of PduA and PduJ in bacterial microcompartment assembly, showing they are essential and redundant, with no compensation from other proteins.

Journal of Molecular Biology · Jan 1, 2021Peer-reviewedMicrobiology

Engineering a virus-like particle to display peptide insertions using an apparent fitness landscape

S. A. Robinson, E. C. Hartman, B. C. Ikwuagwu, M. B. Francis, D. Tullman-Ercek

The paper engineers MS2 virus-like particles with peptide insertions using SyMAPS to map insertion effects on capsid assembly and function.

bioRxiv · Jun 23, 2020Biochemistry