Author

E. A. Hoffman

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 3 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:chromatin & epigenetic regulation· 3 Assay:ChIP-seq· 2 Organism:yeast· 2 Research Focus:cell signaling & trafficking· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:ecology & biodiversity· 1

Frequent Co-Authors

D. T. Auble· 2 shared S. Bekiranov· 2 shared S. J. Shetty· 2 shared A. D'Alessandro· 1 shared A. M. Phoebe· 1 shared B. H. Tracy· 1 shared C. D. Brownstein· 1 shared C. Myles-McBurney· 1 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersBiochemistry

D. T. Auble

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Lactoylglutathione promotes inflammatory signaling in macrophages

M. N. Trujillo, E. Q. Jennings, E. A. Hoffman, H. Zhang, A. M. Phoebe, G. E. Mastin, N. Kitamura, J. A. Reisz, E. Megill, D. Kantner, M. M. Marcinkiewicz, S. M. Twardy, F. Lebario, E. Chapman, R. L. McCullough, , J. J. Galligan

This study shows that lactoylglutathione (LGSH) promotes inflammatory signaling in macrophages by increasing histone lactoylation and chromatin accessibility.

bioRxiv · Oct 10, 2023 · PreprintBiochemistry

Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machinery

K. Kupkova, S. J. Shetty, E. A. Hoffman, S. Bekiranov, D. T. Auble

The paper measures genome-scale chromatin interaction dynamics of RNA Pol II GTFs in budding yeast, revealing kinetic patterns linked to gene function and transcription rates.

bioRxiv · Jul 25, 2023Biochemistry

Hidden species diversity in a living fossil vertebrate

C. D. Brownstein, D. Kim, O. D. Orr, G. M. Hogue, B. H. Tracy, M. W. Pugh, R. Singer, C. Myles-McBurney, J. M. Mollish, J. W. Simmons, S. R. David, G. Watkins-Colwell, E. A. Hoffman, T. J. Near

The paper uses ddRAD sequencing and CT scans to identify a second species in the ancient Bowfin lineage, dating diversification to the Pleistocene.

bioRxiv · Jul 25, 2022 · PreprintEvolutionary Biology

Second-generation method for analysis of chromatin binding using formaldehyde crosslinking kinetics

H. Zaidi, E. A. Hoffman, S. J. Shetty, S. Bekiranov, D. T. Auble

The paper improves the CLK method for analyzing chromatin binding kinetics by refining formaldehyde crosslinking conditions and revealing variability in crosslinking rates for different protein-DNA interactions.

bioRxiv · Jun 21, 2017Biochemistry