Author

E. Lindquist

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Organism:fungi (other)· 1 Research Focus:gene regulatory network inference· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

I. V. Grigoriev· 2 shared K. W. Barry· 2 shared A. Kuo· 1 shared A. Lipzen· 1 shared A. M. Lipzen· 1 shared A. P. Kohler· 1 shared A. Tritt· 1 shared B. A. Simmons· 1 shared

Activity by Year

2019-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersEvolutionary Biology

I. V. Grigoriev

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Author profile →

2 papers

Recent·Most cited

Evolutionary priming and transition to the ectomycorrhizal habit in an iconic lineage of mushroom-forming fungi: is preadaptation a requirement?

B. P. Looney, S. Miyauchi, E. Morin, P.-E. Courty, A. P. Kohler, E. Lindquist, A. Kuo, K. LaButti, J. Pangilinan, A. Lipzen, R. Riley, W. Andreopoulos, G. He, J. Johnson, M. Nolan, , F. M. Martin

This study identifies genomic features of the transition to ectomycorrhizal habit in Russulaceae fungi, finding gene loss, TE expansion, and secreted protein associations with TE nests.

bioRxiv · Feb 23, 2021 · PreprintEvolutionary Biology

Succession of physiological stages hallmarks the transcriptomic response of fungus Aspergillus niger to lignocellulose

J. M. van Munster, P. Daly, M. J. Blythe, R. Ibbett, M. Kokolski, S. Gaddipati, E. Lindquist, V. R. Singan, K. W. Barry, A. M. Lipzen, C. Y. Ngan, C. J. Petzold, L. J. G. Chan, M. Arvas, R. Raulo, , D. B. Archer

This study identifies physiological stages in Aspergillus niger's transcriptomic response to lignocellulose substrates, showing conserved metabolic patterns and substrate-specific adaptations.

bioRxiv · Oct 17, 2019Microbiology