Author

A. Tritt

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Evolutionary Biology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 2 Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. Lipzen· 3 shared I. V. Grigoriev· 3 shared J. Pangilinan· 2 shared K. LaButti· 2 shared K. W. Barry· 2 shared A. Carver· 1 shared A. Kuo· 1 shared A. P. Camargo· 1 shared

Activity by Year

2021-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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3 shared papersEvolutionary Biology

A. Lipzen

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

iPHoP: an integrated machine-learning framework to maximize host prediction for metagenome-assembled virus genomes

S. Roux, A. P. Camargo, F. H. Coutinho, S. M. Dabdoub, B. E. Dutilh, S. Nayfach, A. Tritt

iPHoP integrates multiple methods to predict viral hosts from metagenome-derived genomes with low false discovery rate.

bioRxiv · Jul 28, 2022Microbiology

Divergent evolution of early terrestrial fungi reveals the evolution of Mucormycosis pathogenicity factors

Y. Wang, Y. Chang, J. Ortanez, J. F. Pena, D. Carter-House, N. K. Reynolds, M. E. Smith, G. Benny, S. J. Mondo, A. Salamov, A. Lipzen, J. Pangilinan, J. Guo, K. LaButti, W. Andreopolous, , J. E. Stajich

This study investigates the divergent evolution of zygomycete fungi, identifying lineage-specific genomic elements and evolutionary relationships that contribute to Mucormycosis pathogenicity.

bioRxiv · Jun 24, 2022Evolutionary Biology

The transcription factor Roc1 is a regulator of cellulose degradation in the wood-decaying mushroom Schizophyllum commune

I. M. Marian, P. J. Vonk, I. D. Valdes, K. Barry, B. Bostock, A. Carver, C. Daum, H. Lerner, A. Lipzen, H. Park, M. B. P. Schuller, M. Tegelaar, A. Tritt, J. Schmutz, J. Grimwood, , R. A. Ohm

This study identifies Roc1 as a key transcription factor regulating cellulose degradation in the wood-decaying fungus Schizophyllum commune through genomic and transcriptomic analyses.

bioRxiv · Jun 8, 2021 · PreprintMicrobiology

Evolutionary priming and transition to the ectomycorrhizal habit in an iconic lineage of mushroom-forming fungi: is preadaptation a requirement?

B. P. Looney, S. Miyauchi, E. Morin, P.-E. Courty, A. P. Kohler, E. Lindquist, A. Kuo, K. LaButti, J. Pangilinan, A. Lipzen, R. Riley, W. Andreopoulos, G. He, J. Johnson, M. Nolan, , F. M. Martin

This study identifies genomic features of the transition to ectomycorrhizal habit in Russulaceae fungi, finding gene loss, TE expansion, and secreted protein associations with TE nests.

bioRxiv · Feb 23, 2021 · PreprintEvolutionary Biology