Author

Eamon Collins

University of Virginia

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Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

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Andrew Norton· 1 shared Derrick Blakely· 1 shared Jack LanchantiniD· 1 shared Ritambhara SinghiD· 1 shared Yanjun QiiD· 1 shared

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2020-2020 · peak 1/yr

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1 shared paperBioinformatics

Andrew Norton

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1 paper

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedSep 8, 2020

FastSK: Fast Sequence Analysis with Gapped String Kernels

Derrick Blakely, Eamon Collins, Ritambhara Singh…·Yanjun Qi

FastSK improves the speed and scalability of gapped k-mer kernel computations for sequence analysis tasks, outperforming existing methods in both speed and accuracy.

6 citations

DNA methylationwhole-genome sequencing

𝕏 PostBluesky