Author

F. Serra

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. Valencia· 2 shared A. Armaos· 1 shared B. A. Camley· 1 shared C. Giambartolomei· 1 shared D. Cirillo· 1 shared E. Castillo de Santa Pau· 1 shared E. Lapi· 1 shared F. Le Dily· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersCancer Biology

A. Valencia

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Migration and division in cell monolayers on substrates with topological defects

K. Kaiyrbekov, K. Endresen, K. Sullivan, Y. Chen, Z. Zheng, F. Serra, B. A. Camley

The paper studies fibroblast organization and proliferation on substrates with topological defects using simulation and experiment, finding that division rates depend on cell area and aspect ratio.

bioRxiv · Dec 22, 2022Cell Biology

The PENGUIN approach to reconstruct protein interactions at enhancer-promoter regions and its application to prostate cancer

A. Armaos, F. Serra, I. Nunez Carpintero, J. H. Seo, S. C. Baca, S. Gustincich, A. Valencia, M. L. Freedman, D. Cirillo, C. Giambartolomei, G. G. Tartaglia

PENGUIN reconstructs protein interactions at enhancer-promoter regions and identifies cancer-associated SNPs in prostate cancer cell lines.

bioRxiv · Oct 20, 2022Cancer Biology

STAG2 loss-of-function affects short-range genomic contacts and modulates urothelial differentiation in bladder cancer cells

L. Richart Gines, E. Lapi, V. Pancaldi, M. Cuenca, E. Castillo de Santa Pau, M. Madrid, H. Neyret-Kahn, F. Radvanyi, J. Rodriguez, Y. Cuartero, F. Serra, F. Le Dily, A. Valencia, M. A. Marti-Renom, F. X. Real

This study investigates how STAG2 loss-of-function affects genomic contacts and urothelial differentiation in bladder cancer cells, finding that STAG2 is critical for DNA looping that sustains luminal differentiation.

bioRxiv · Aug 6, 2020 · PreprintCancer Biology