Author

I. Deb

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Organism:human· 1 Assay:multiome· 1 Assay:proteomics· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

A. T. Frank· 2 shared A. Lahiri· 1 shared B. Roy· 1 shared J. G. Monroe· 1 shared J. Sarzynska· 1 shared K. S. Koutmou· 1 shared L. Mitchell· 1 shared N. Dutta· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 13 mutual co-author links

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2 shared papersBiochemistry

A. T. Frank

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3 papers

Recent·Most cited

Structural and thermodynamic consequences of base pairs containing pseudouridine and N1-methylpseudouridine in RNA duplexes

N. Dutta, I. Deb, J. Sarzynska, A. Lahiri

This study examines the structural and thermodynamic effects of pseudouridine and N1-methylpseudouridine in RNA duplexes, showing context-dependent stabilization by N1-methylpseudouridine.

bioRxiv · Mar 19, 2023Biophysics

N1-Methylpseudouridine and pseudouridine modifications modulate mRNA decoding during translation

J. G. Monroe, L. Mitchell, I. Deb, B. Roy, A. T. Frank, K. S. Koutmou

This study investigates how N1-methylpseudouridine and pseudouridine modifications affect mRNA decoding during translation, showing they influence amino acid misincorporation depending on codon position and tRNA context.

bioRxiv · Jun 13, 2022Biochemistry

Accelerating Dissociative Events in Molecular Dynamics Simulations by Selective Potential Scaling

I. Deb, A. T. Frank

This paper introduces a method to accelerate dissociative events in MD simulations by selectively scaling potential energy terms, demonstrating its effectiveness in ligand unbinding.

bioRxiv · Feb 19, 2019 · PreprintBiophysics