Author

A. Lahiri

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Animal Behavior & Cognition· 1 Biochemistry· 1 Biophysics· 1 Cell Biology· 1 Evolutionary Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:proteomics· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

B. A. Adler· 2 shared J. A. Doudna· 2 shared A. Bhadra· 1 shared A. Dasgupta· 1 shared A. G. McGavigan· 1 shared A. Kaushik· 1 shared A. Manchalwar· 1 shared A. N. Ganesan· 1 shared

Activity by Year

2019-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 6 mutual co-author links

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2 shared papersBiochemistry

B. A. Adler

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

Hachiman is a genome integrity sensor

O. T. Tuck, B. A. Adler, E. G. Armbruster, A. Lahiri, J. J. Hu, J. Zhou, J. Pogliano, J. A. Doudna

This study identifies Hachiman as a bacterial antiphage defense system that degrades all DNA in response to DNA damage, revealing its role as a genome integrity sensor.

bioRxiv · Feb 29, 2024 · PreprintBiochemistry

Ready, set, yellow! Color Preference of Indian Free-ranging Dogs

A. Roy, A. Lahiri, S. Nandi, A. Manchalwar, S. S, A. Bhadra

This study investigates color preference in Indian free-ranging dogs, finding a strong preference for yellow over blue and gray, and yellow over food rewards.

bioRxiv · Feb 1, 2024Animal Behavior & Cognition

Genome-wide Characterization of Diverse Bacteriophages Enabled by RNA-Binding CRISPRi

B. A. Adler, M. J. Al-Shimary, J. R. Patel, E. Ambruster, D. Colognori, E. J. Charles, K. V. Miller, A. Lahiri, M. Trinidad, R. Boger, J. Nomburg, S. Beurnier, M. L. Cui, R. Barrangou, V. K. Mutalik, , B. F. Cress

The paper develops a CRISPRi-ART system to knock down protein expression in diverse bacteriophages and identifies essential genes, including many with unknown functions.

bioRxiv · Sep 18, 2023 · PreprintMicrobiology

Structural and thermodynamic consequences of base pairs containing pseudouridine and N1-methylpseudouridine in RNA duplexes

N. Dutta, I. Deb, J. Sarzynska, A. Lahiri

This study examines the structural and thermodynamic effects of pseudouridine and N1-methylpseudouridine in RNA duplexes, showing context-dependent stabilization by N1-methylpseudouridine.

bioRxiv · Mar 19, 2023Biophysics

Salmonella Typhimurium effector SseI regulates host peroxisomal dynamics to acquire lysosomal cholesterol for better intracellular growth

D. Raj, A. V. Nair, J. Sharma, S. Prakash, A. Kaushik, S. Basu, S. Sahu, S. Singh, V. Bhosale, T. Chandra, U. C. Ghoshal, A. Dasgupta, M. I. Siddiqi, S. K. Gupta, D. Chakravortty, , A. LAHIRI

The paper shows Salmonella effector SseI recruits peroxisomes to SCVs, activates ARF-1, and facilitates cholesterol transport for bacterial growth.

bioRxiv · Feb 27, 2023 · PreprintCell Biology

Emergence of multiple variants of SARS-CoV-2 with signature structural changes

D. Bhowmik, S. Pal, A. Lahiri, A. Talukdar, S. Paul

This study analyzes SARS-CoV-2 genome divergence and identifies structural changes in viral proteins across four distinct genetic groups.

bioRxiv · Apr 26, 2020 · PreprintEvolutionary Biology

Renewal theory provides a universal quantitative framework to characterise the continuous regeneration of rotational events in cardiac fibrillation

D. Dharmaprani, M. Schopp, P. Kuklik, D. Chapman, A. Lahiri, L. Dykes, F. Xiong, M. Aguilar, B. Strauss, L. Mitchell, K. Pope, C. Meyer, S. Willems, F. G. Akar, S. Nattel, , A. N. Ganesan

The paper applies renewal theory to model phase singularity dynamics in cardiac fibrillation across species, finding exponential inter-event time distributions with consistent rate parameters.

bioRxiv · Apr 4, 2019 · PreprintPhysiology