Author

J. Abbott

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Microbiology· 2 Bioengineering· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Research Focus:host-pathogen & immune response· 5 Assay:metagenomics· 4 Organism:plant (other)· 3 Organism:Drosophila· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

C. Escudero-Martinez· 3 shared D. Bulgarelli· 3 shared J. Morris· 3 shared P. E. Hedley· 3 shared B. S. Onder· 2 shared C. Montchamp-Moreau· 2 shared C. P. Vieira· 2 shared E. Argyridou· 2 shared

Activity by Year

2019-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersPlant Biology

C. Escudero-Martinez

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Author profile →

7 papers

Recent·Most cited

A semiconductor 96-microplate platform for real-time impedance-based high-throughput screening

S. Chitale, W. Wu, A. Mukherjee, H. Lannon, P. Suresh, I. Nag, C. Ambrosi, R. A. Gertner, H. Melo, B. Powers, H. Wilkins, H. Hinton, M. Cheah, Z. Boynton, A. Alexeyev, , J. Abbott

This paper introduces a semiconductor microplate platform for real-time impedance-based high-throughput screening, demonstrating its ability to profile compound mechanisms of action across diverse cell types.

bioRxiv · Jun 1, 2023Bioengineering

Defining composition and function of the rhizosphere microbiota of barley genotypes exposed to growth-limiting nitrogen supplies

R. Alegria Terrazas, S. Robertson-Albertyn, A. M. Corral, C. Escudero-Martinez, R. Kapadia, K. Balbirnie-Cumming, J. Morris, P. E. Hedley, M. Barret, G. Torres, E. Paterson, L. M. Baggs, J. Abbott, D. Bulgarelli

This study investigates how nitrogen availability affects the composition and function of the rhizosphere microbiota in barley genotypes, showing host genetic control over microbial communities under nitrogen-limiting conditions.

bioRxiv · Sep 23, 2022 · PreprintPlant Biology

IDENTIFYING PLANT GENES SHAPING MICROBIOTA COMPOSITION IN THE BARLEY RHIZOSPHERE

C. Escudero-Martinez, M. Coulter, R. Alegria Terrazas, A. Foito, R. Kapadia, L. Pietrangelo, M. Maver, R. Sharma, A. Aprile, J. Morris, P. E. Hedley, A. Maurer, K. Pillen, G. Naclerio, T. Mimmo, , D. Bulgarelli

The paper identifies plant genes influencing rhizosphere microbiota composition in barley using metagenomics and RNA-seq.

bioRxiv · Dec 20, 2021Plant Biology

Applications of the indole-alkaloid gramine modulate the assembly of individual members of the barley rhizosphere microbiota

M. Maver, C. Escudero-Martinez, J. Abbott, J. Morris, P. E. Hedley, T. Mimmo, D. Bulgarelli

This study investigates how exogenous gramine affects the barley rhizosphere microbiota, revealing its role in modulating microbial community assembly.

bioRxiv · Dec 7, 2020Plant Biology

The discovery, distribution and diversity of DNA viruses associated with Drosophila melanogaster in Europe

M. A. Wallace, K. A. Coffman, C. Gilbert, S. Ravindran, G. F. Albery, J. Abbott, E. Argyridou, P. Bellosta, A. J. Betancourt, H. Colinet, K. Eric, A. Glaser-Schmitt, S. Grath, M. Jelic, M. Kankare, , D. J. Obbard

The paper identifies and characterizes DNA viruses in Drosophila melanogaster across Europe, revealing new viral lineages and prevalence patterns.

bioRxiv · Oct 16, 2020 · PreprintMicrobiology

Genomic analysis of European Drosophila populations reveals major longitudinal structure, continent-wide selection, and unknown DNA viruses

M. Kapun, M. G. Barron Aduriz, F. Staubach, D. Obbard, R. A. W. Wiberg, J. Vieira, C. Goubert, O. Rota Stabelli, M. Kankare, M. Bogaerts-Marquez, A. Haudry, L. Waidele, I. Kozeretska, E. Pasyukova, V. Loeschcke, , J. Parsch

The paper analyzes genomic variation in European Drosophila populations, revealing longitudinal structure, continent-wide selection, and new DNA viruses.

bioRxiv · Mar 11, 2020Evolutionary Biology

Pulcherrimin formation controls growth arrest of the Bacillus subtilis biofilm

S. Arnaouteli, D. A. Matoz Fernandez, M. Porter, M. Kalamara, J. Abbott, C. MacPhee, F. Davidson, N. Stanley-Wall

This study shows that pulcherrimin formation in Bacillus subtilis stops biofilm expansion by chelating iron, while also protecting the biofilm from invasion by neighboring communities.

bioRxiv · Mar 9, 2019Microbiology