Author

J. Vilcapoma

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioengineering· 2 Biophysics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Assay:DNA methylation· 2 Research Focus:drug response / drug discovery· 2 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:metabolomics· 1 Assay:metagenomics· 1

Frequent Co-Authors

A. R. Chandrasekaran· 3 shared K. Halvorsen· 3 shared A. Chen· 1 shared A. Hayden· 1 shared B. K. Dey· 1 shared C. H. Hansen· 1 shared D. Yang· 1 shared J. A. Punnoose· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioengineering

A. R. Chandrasekaran

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

High-throughput single-molecule quantification of individual base stacking energies in nucleic acids

J. A. Punnoose, K. J. Thomas, A. R. Chandrasekaran, J. Vilcapoma, A. Hayden, K. Kilpatrick, S. Vangaveti, A. Chen, T. Banco, K. Halvorsen

This study measures individual base stacking energies in DNA and RNA using a custom Centrifuge Force Microscope, finding stronger stacking between purines and weaker between pyrimidines, with implications for DNA nanostructures, enzymatic ligation, and MD simulations.

bioRxiv · May 25, 2022Biophysics

DNA nanoswitch barcodes for multiplexed biomarker profiling

A. R. Chandrasekaran, M. MacIsaac, J. Vilcapoma, C. H. Hansen, D. Yang, W. P. Wong, K. Halvorsen

This paper introduces DNA nanoswitch barcodes for multiplexed detection of up to 6 biomarkers in a single assay, demonstrating mixed multiplexing of DNA, RNA, antibody, and protein.

bioRxiv · Sep 22, 2020Bioengineering

Exceptional biostability of paranemic crossover (PX) DNA, crossover-dependent nuclease resistance, and implications for DNA nanotechnology

A. R. Chandrasekaran, J. Vilcapoma, P. Dey, S. W. Wong-Deyrup, B. K. Dey, K. Halvorsen

The paper investigates the nuclease resistance and biostability of PX DNA, finding it significantly more resistant to degradation than double-stranded DNA and suggesting its potential for enhancing DNA nanotechnology.

bioRxiv · Jan 7, 2020Bioengineering