Author

K. Holt

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Animal Behavior & Cognition· 1 Biophysics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Approach:experimental assay· 2 Organism:human· 2 Assay:imaging· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

A. C. Keene· 1 shared A. Fostervold· 1 shared A. Patch· 1 shared A. Paz· 1 shared A. Sundsfjord· 1 shared A. T. Lopez-Jimenez· 1 shared C. Jenkins· 1 shared E. Bernhoff· 1 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 9 mutual co-author links

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1 shared paperAnimal Behavior & Cognition

A. C. Keene

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Author profile →

6 papers

Recent·Most cited

Spatiotemporal Modeling of Mitochondrial Network Architecture

K. Holt, J. Winter, S. Manley, E. F. Koslover

This study models mitochondrial network dynamics using simulations and analytic models to show how local parameters control network morphology and remodeling rates.

PRX Life · Oct 8, 2024Peer-reviewedBiophysics

Acquisition of a large virulence plasmid (pINV) promoted temperature-dependent virulence and global dispersal of O96:H19 enteroinvasive Escherichia coli

S. L. Miles, V. Torraca, Z. A. Dyson, A. T. Lopez-Jimenez, E. Foster-Nyarko, C. Jenkins, K. Holt, S. Mostowy

The paper shows that acquisition of the pINV plasmid in ST99 E. coli made its virulence temperature-dependent, aiding global dispersal.

bioRxiv · Oct 27, 2022 · PreprintMicrobiology

A nationwide genomic study of clinical Klebsiella pneumoniae in Norway 2001-2015: Introduction and spread of ESBL facilitated by CG15 and CG307

A. Fostervold, M. A. K. Hetland, R.-J. Bakksjo, E. Bernhoff, K. Holt, O. Samuelsen, G. S. Simonsen, A. Sundsfjord, K. L. Wyres, I. H. Lohr, The Norwegian Study Group on Klebsiella pneumoniae

This study analyzes the genomic changes in Klebsiella pneumoniae in Norway from 2001-2015, identifying the spread of ESBL-producing strains driven by CG307 and CG15.

bioRxiv · Jul 16, 2021Microbiology

Precise automatic classification of 46 different pollen types with convolutional neural networks

V. Sevillano, K. Holt, J. L. Aznarte

The paper introduces a deep learning method that automatically classifies 46 pollen types with 98% accuracy, surpassing previous manual and automated methods.

bioRxiv · Feb 14, 2020Plant Biology

Kinematic analysis deconstructs the evolved loss of schooling behavior in cavefish

A. Patch, A. Paz, K. Holt, E. R. Duboue, J. E. Kowalko, A. C. Keene, Y. Fily

The paper uses kinematic analysis to show that cavefish's loss of schooling behavior is an adaptive strategy, not just a sensory limitation, and is consistent across independently evolved populations.

bioRxiv · Jan 31, 2020 · PreprintAnimal Behavior & Cognition

Insights from the revised complete genome sequences of Acinetobacter baumannii strains AB307-0294 and ACICU belonging to global clone 1 and 2

M. Hamidian, R. Wick, R. M. Hartstein, L. M. Judd, K. Holt, R. M. Hall

The paper re-sequences two Acinetobacter baumannii strains using improved technologies, correcting errors in their genome sequences and annotations.

bioRxiv · May 20, 2019Microbiology