The paper introduces a framework for curating interspecies interaction literature, using PHI-base as a case study, and presents a community curation tool called PHI-Canto.

bioRxiv · Dec 15, 2022Microbiology

Serotyping Salmonella Enteritidis and Typhimurium Using Whole Cell Matrix Assisted Laser Desorption Ionization - Time of Flight Mass Spectrometry (MALDI-TOF MS) through Multivariate Analysis and Artificial Intelligence

A. Gao, J. Fischer-Jenssen, D. Slavic, K. Rutherford, S. Lippert, E. Wilson, S. Chen, C. G. Leon-Velarde, P. Martos

This study uses MALDI-TOF MS and AI to accurately serotype Salmonella strains, achieving 100% correct identification of Enteritidis, Typhimurium, and other serovars.

bioRxiv · Jul 1, 2022 · PreprintMicrobiology

Single cell genotyping of matched bone marrow and peripheral blood cells in treatment naive and AZA-treated MDS and CMML

A. Schnegg-Kaufmann, J. A. I. Thoms, G. S. Bhuyan, H. R. Hampton, L. Vaughan, K. Rutherford, P. M. Kakadia, E. M. V. Johansson, T. Failes, G. M. Arndt, J. Koval, R. Lindeman, P. Warbuton, A. Rodriguez-Meira, A. J. Mead, , J. E. Pimanda

This study examines the contribution of mutated hematopoietic stem and progenitor cells to blood cell populations in MDS and CMML before and after AZA treatment.

bioRxiv · Jan 20, 2022 · PreprintCancer Biology