BioinformaticsbioRxivPreprint
TOP the Transcription Orientation Pipeline and its use to investigate the transcription of non-coding regions: assessment with CRISPR direct repeats and intergenic sequences.
Kimberley Houenoussi, Roudaina Boukheloua, Jean‐Philippe Vernadet…·Christine Pourcel
The paper introduces TOP, a pipeline to determine transcription orientation of sequences using RNA-Seq data, validated on CRISPR repeats and small RNAs in Staphylococcus aureus.
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