BiophysicsbioRxiv
RNA structure prediction including pseudoknots through direct enumeration of states
O. Kimchi, T. Cragnolini, M. P. Brenner, L. J. Colwell
This paper introduces a new RNA secondary structure prediction method that accurately predicts pseudoknots by combining a polymer physics model with exhaustive enumeration of possible structures.
DOI 10.1016/j.bpj.2019.06.037