GenomicsbioRxiv
SRST2: Rapid genomic surveillance for public health and hospital microbiology labs
Michael Inouye, Harriet Dashnow, Lesley Raven…·Kathryn E Holt
SRST2 is a tool for rapid and accurate detection of genes and alleles from whole genome sequencing data, outperforming assembly-based methods in public health and hospital settings.
DOI 10.1186/s13073-014-0090-6