Author

Li Shen

Shanghai Medical College of Fudan University

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Same name, identified by ORCID

Biology Disciplines

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Bioinformatics· 2 Bioengineering· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 3 Approach:statistical model· 3 Approach:experimental assay· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Assay:electronic health records· 1 Research Focus:eQTL / molecular QTL mapping· 1

Frequent Co-Authors

Junbo GeiD· 3 shared Lingsen YouiD· 3 shared Wentong WangiD· 2 shared Xinyu Zhong· 2 shared Yujun Guo· 2 shared Zisu Peng· 2 shared Chang Gao· 1 shared Diego Shih-Chieh Lin· 1 shared

Activity by Year

2016-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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3 shared papersBioinformatics

Junbo GeORCID

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Author profile →

4 papers

Recent·Most cited

A public-data reproducibility benchmark of a 2.5-D U-Net with a slice-level topology term for type-B aortic dissection segmentation

Lingsen You, Yujun Guo, Xinyu Zhong, Zisu Peng, Wentong Wang, Li Shen, Junbo Ge

The paper benchmarks a 2.5-D U-Net with a slice-level topology term for type-B aortic dissection segmentation using public CTA data, finding no consistent benefit from the topology term.

bioRxiv · Oct 15, 2026 · PreprintBioinformatics

Panvascular-JEPA: Unseen-Structure Evaluation of Factorized Predictive States for Hemodynamic Networks

Lingsen You, Zijie Feng, Chang Gao, Yingcheng Wu, Zhenfei Yin, Ling Yang, Li Shen, Junbo Ge

The paper evaluates predictive models for hemodynamic networks on unseen structures, comparing their performance against known equations and finding neural models underperform compared to traditional methods.

bioRxiv · Oct 14, 2026 · PreprintBioengineering

PanVasc Research for AI assisted evidence analysis in panvascular intervention

Lingsen You, Yujun Guo, Wentong Wang, Zisu Peng, Xinyu Zhong, Li Shen, Junbo Ge

The paper evaluates an AI framework for evidence analysis in panvascular intervention using clinical trial data and NLI4CT tasks, showing improved accuracy with checklist prompts over generic ones.

bioRxiv · Sep 28, 2026 · PreprintBioinformatics

Incidental identification of maternal malignancies in two Asian women underwent noninvasive prenatal test

Xing Ji, Fang Chen, Yafeng Zhou, Jia Li, Yuying Yuan, Yu Mo, Qiang Liu, Jen-Yu Tseng, Diego Shih-Chieh Lin, Shu-Huei Shen, Yu Liu, Weiping Ye, Hongyun Zhang, Na Liu, Li Shen, , Mao Mao

This study reports two cases of maternal malignancies detected incidentally during noninvasive prenatal tests in Asian women, showing concordant genome disruption patterns between tumor samples and NIPT results.

bioRxiv · Dec 19, 2016 · PreprintCancer Biology