Author

Neeraja M Krishnan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:machine learning (classical)· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

Binay PandaiD· 3 shared Saurabh GuptaiD· 3 shared Amritha Suresh· 2 shared Arun K Hariharan· 2 shared Costerwell KhyriemiD· 2 shared Gangotri Siddappa· 2 shared Prachi Jain· 2 shared Vinayak Palve· 2 shared

Activity by Year

2015-2016 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Binay PandaORCID

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3 papers

Recent·Most cited

BioinformaticsG3 Genes|Genomes|GeneticsPeer-reviewedJul 1, 2016

An Improved Genome Assembly of Azadirachta indica A. Juss.

Neeraja M Krishnan, Prachi Jain, Saurabh Gupta…·Binay Panda

The paper presents an improved genome assembly of Azadirachta indica using long-read sequencing and error correction, resulting in better contiguity and gene mapping.

DOI 10.1534/g3.116.030056

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsbioRxivPreprintDec 7, 2015

Integrated analysis links TP53, NOTCH, SLC38A and 11p with survival in patients with oral tongue squamous cell carcinoma

Neeraja M Krishnan, Saurabh Gupta, Costerwell Khyriem…·Binay Panda

The paper identifies genetic and epigenetic factors associated with survival in oral tongue squamous cell carcinoma, showing their association with HPV status and specific molecular pathways.

DOI 10.1101/033829

humanwhole-exome sequencing

𝕏 PostBluesky

GenomicsbioRxivOct 11, 2015

Integrated analysis of oral tongue squamous cell carcinoma identifies key variants and pathways linked to risk habits, HPV, clinical parameters and tumor recurrence

Neeraja M Krishnan, Saurabh Gupta, Vinayak Palve…·Binay Panda

DOI 10.12688/f1000research.7302.1

humanwhole-genome sequencing

𝕏 PostBluesky