Author

P. Cubry

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Evolutionary Biology· 2 Physiology· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 6 Approach:statistical model· 6 Research Focus:gene regulatory network inference· 3 Assay:whole-genome sequencing· 3 Research Focus:variant calling· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:development & morphogenesis· 1

Frequent Co-Authors

y. Vigouroux· 4 shared A. Champion· 2 shared A. G. Diedhiou· 2 shared A. Grondin· 2 shared L. Laplaze· 2 shared O. Francois· 2 shared P. Gantet· 2 shared A. Barnaud· 1 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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4 shared papersPlant Biology

y. Vigouroux

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Author profile →

6 papers

Recent·Most cited

A quantitative theory for genomic offset statistics

C. Gain, B. Rhone, P. CUBRY, I. Salazar, F. Forbes, y. Vigouroux, F. Jay, O. Francois

The paper develops a theoretical framework to interpret genomic offset statistics and validates it using simulations and empirical data on African pearl millet.

Molecular Biology and Evolution · Jun 12, 2023Peer-reviewedEvolutionary Biology

Genomic evidence of genuine wild versus admixed olive populations evolving in the same natural environments in western Mediterranean Basin

L. Zunino, P. Cubry, G. Sarah, P. Mournet, A. El Bakkali, L. Aqbouch, E. Costes, B. Khadari

The paper investigates genetic structure in wild and cultivated olive populations in the western Mediterranean Basin, finding more admixed than genuine wild olive trees.

bioRxiv · Apr 18, 2023Evolutionary Biology

High-throughput phenotyping reveals a link between transpiration efficiency and transpiration restriction under high evaporative demand and new loci controlling water use-related traits in African rice, Oryza glaberrima Steud.

P. Affortit, B. Effa Effa, M. S. Ndoye, D. Moukouanga, N. Luchaire, L. Cabrera-Bosquet, M. C. Peralvarez, R. Pilloni, C. Welcker, A. Champion, P. Gantet, A. G. Diedhiou, B. Manneh, R. Aroca, V. Vadez, , A. Grondin

The paper identifies genetic links between transpiration efficiency and restriction in African rice, finding heritable traits that could improve water use strategies in breeding.

bioRxiv · Nov 28, 2021 · PreprintPhysiology

Genetic control of rhizosheath formation in pearl millet

C. de la Fuente Canto, M. N. Diouf, P. M. S. Ndour, M. Debieu, A. Grondin, S. Passot, A. Champion, C. Barrachina, M. Pratlong, P. Gantet, K. Assigbetse, N. Kane, P. Cubry, A. G. Diedhiou, T. Heulin, , L. Laplaze

This study identifies genetic factors controlling rhizosheath formation in pearl millet, showing it is mainly regulated by root exudation and involves complex genetic control.

bioRxiv · Nov 2, 2021Plant Biology

Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate

M. Abrouk, H. I. Ahmed, P. CUBRY, D. Simonikova, S. Cauet, J. Bettgenhaeuser, L. Gapa, Y. Pailles, N. Scarcelli, M. Couderc, L. Zekraoui, N. Kathiresan, J. Cizkova, E. Hribova, J. Dolezel, , S. G. Krattinger

The paper presents a high-quality genome assembly and re-sequencing data for fonio millet to study its genetic diversity and domestication.

bioRxiv · Apr 11, 2020Plant Biology

Genome wide association study pinpoints key agronomic QTLs in African rice Oryza glaberrima

P. CUBRY, H. Pidon, K. N. Ta, C. Tranchant-Dubreuil, A.-C. Thuillet, M. Holzinger, H. Adam, H. Kam, H. Chrestin, A. Ghesquiere, O. Francois, F. Sabot, Y. Vigouroux, L. Albar, S. Jouannic

This study identifies key agronomic QTLs in African rice Oryza glaberrima through a genome-wide association study, focusing on flowering time, panicle architecture, and virus resistance.

bioRxiv · Jan 7, 2020Plant Biology