Author

Patrick J. Farber

Zymeworks (Canada)

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Biology Disciplines

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Bioengineering· 1

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Approach:deep learning· 1 Research Focus:protein design· 1 Assay:protein sequence· 1 Research Focus:sequence-to-function modeling· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Abhishek Mukhopadhyay· 1 shared Greg Lakatos· 1 shared J. Liam McWhirter· 1 shared Surjit B. DixitiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

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4 top collaborators · 6 mutual co-author links

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1 shared paperBioengineering

Abhishek Mukhopadhyay

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1 paper

Recent·Most cited

BioengineeringbioRxivPreprintApr 12, 2023

Automated Protein Affinity Optimization using a 1D-CNN Deep Learning Model

J. Liam McWhirter, Abhishek Mukhopadhyay, Patrick J. Farber…·Surjit B. Dixit

This paper introduces ZymeSwapNet, a 1D-CNN model for protein sequence prediction that optimizes design objectives like stability and binding specificity in antibody domains.

DOI 10.1101/2023.04.12.536512

protein sequencedeep learning

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