Author

Q. Dowling

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Biochemistry· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 3 Research Focus:protein design· 2 Assay:protein structure· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:protein folding & dynamics· 1 Assay:protein sequence· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

D. Baker· 3 shared E. C. Yang· 2 shared N. P. King· 2 shared Y. Hsia· 2 shared A. Burrell· 1 shared A. Goodson· 1 shared A. K. Bera· 1 shared A. Kang· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBioengineering

D. Baker

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Rapid and automated design of two-component protein nanomaterials using ProteinMPNN

R. J. de Haas, N. Brunette, A. Goodson, J. Dauparas, S. Y. Yi, E. C. Yang, Q. Dowling, H. Nguyen, A. Kang, A. K. Bera, B. Sankaran, R. de Vries, D. Baker, N. P. King

This study benchmarks ProteinMPNN against Rosetta in designing two-component protein nanomaterials, showing comparable success with significantly reduced computation and no manual refinement.

bioRxiv · Aug 4, 2023Biochemistry

Hierarchical design of pseudosymmetric protein nanoparticles

Q. Dowling, Y.-J. Park, N. Gerstenmaier, E. Yang, A. Wargacki, Y. Hsia, C. Fries, R. Ravichandran, C. Walkey, A. Burrell, D. Veesler, D. Baker, N. King

The paper designs large pseudosymmetric protein nanoparticles using a hierarchical computational method, achieving sizes up to 96 nm with 960 subunits.

bioRxiv · Jun 16, 2023 · PreprintBioengineering

Fast and versatile sequence-independent protein docking for nanomaterials design using RPXDock

W. Sheffler, E. C. Yang, Q. Dowling, Y. Hsia, C. N. Fries, J. Stanislaw, M. Langowski, M. Brandys, A. Khmelinskaia, N. P. King, D. Baker

RPXDock enables fast, flexible protein docking for symmetric architectures, supporting diverse applications in nanomaterial design.

bioRxiv · Oct 25, 2022Bioengineering