Author

S. Arslan

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 2 Zoology· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:ecology & biodiversity· 2 Approach:experimental assay· 2 Organism:human· 2 Assay:imaging· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

A. Geraldes· 2 shared C. Bass· 2 shared D. Mehrotra· 2 shared J. Hense· 2 shared J. Schmidt· 2 shared P. Pandya· 2 shared P. Raharja-Liu· 2 shared S. Singhal· 2 shared

Activity by Year

2020-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 36 mutual co-author links

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2 shared papersCancer Biology

A. Geraldes

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Current Situation of Breeding Bird Species in the Gediz Delta, Turkey

S. Arslan, A. Kaya, A. Akyol, M. Kaya

The paper assesses changes in breeding bird species in the Gediz Delta, Turkey, over 15 years, finding an increase in breeding species and identifying threat factors.

bioRxiv · Jun 11, 2022 · PreprintZoology

Deep learning can predict multi-omic biomarkers from routine pathology images: A systematic large-scale study

S. Arslan, D. Mehrotra, J. Schmidt, A. Geraldes, S. Singhal, J. Hense, X. Li, C. Bass, J. N. Kather, P. Pandya, P. Raharja-Liu

This study shows deep learning can predict multi-omic biomarkers from H&E-stained cancer slides, with 50% of models achieving AUC > 0.633 across 32 cancer types.

bioRxiv · Jan 21, 2022 · PreprintCancer Biology

Evaluation of a predictive method for the H&E-based molecular profiling of breast cancer with deep learning

S. Arslan, X. Li, J. Schmidt, J. Hense, A. Geraldes, C. Bass, K. Brown, A. Marcia, T. Dewhirst, P. Pandya, S. Singhal, D. Mehrotra, P. Raharja-Liu

The paper validates a deep learning method that predicts breast cancer biomarkers from H&E slides with high accuracy in a clinical setting.

bioRxiv · Jan 4, 2022 · PreprintCancer Biology

Major threats to a migratory raptor vary geographically along the eastern Mediterranean flyway

S. Oppel, V. Arkumarev, S. Bakari, V. Dobrev, V. Saravia, S. Adefolu, L. Aktay Sozuer, P. T. Apeverga, S. Arslan, Y. Barshep, T. Bino, A. Bounas, T. Cetin, M. Dayyoub, D. Dobrev, , Tesf

The paper assesses geographic variation in threats to Egyptian Vultures along the eastern Mediterranean flyway using tracking, surveys, and interviews, finding differing mortality causes across regions.

bioRxiv · Dec 16, 2020Zoology