Author

Shannon R. McCurdy

QB3

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:clustering· 1 Approach:matrix factorization· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Lior S. PachteriD· 1 shared Vasilis NtranosiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Lior S. PachterORCID

Mutual co-authors in cluster

Author profile →

1 paper

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedJan 25, 2019

Column subset selection for single-cell RNA-Seq clustering

Shannon R. McCurdy, Vasilis Ntranos, Lior S. Pachter

This paper introduces a deterministic column subset selection method for scRNA-Seq clustering, showing it performs similarly to full data clustering while avoiding some limitations of PCA and thresholding methods.

5 citations

scRNA-seqmatrix factorization

𝕏 PostBluesky