Author

Sirajul Salekin

The University of Texas at San Antonio

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:deep learning· 2 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Assay:ChIP-seq· 1 Approach:contrastive learning· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Yufei HuangiD· 2 shared Jianqiu Michelle Zhang· 1 shared Jianqiu ZhangiD· 1 shared Milad Mostavi· 1 shared Yidong CheniD· 1 shared Yu‐Chiao ChiuiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

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2 shared papersBioinformatics

Yufei HuangORCID

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2 papers

Recent·Most cited

BioinformaticsFrontiers in PhysicsPeer-reviewedJun 19, 2020

Predicting sites of epitranscriptome modifications using unsupervised representation learning based on generative adversarial networks

Sirajul Salekin, Milad Mostavi, Yu‐Chiao Chiu…·Yufei Huang

The paper introduces MR-GAN, a GAN-based model for predicting epitranscriptome modification sites using unsupervised learning, showing significant improvement over one-hot encoding and SRAMP.

16 citations

long-read sequencingDNA methylation

𝕏 PostBluesky

GenomicsBioinformaticsPeer-reviewedMay 3, 2018

Base-pair resolution detection of transcription factor binding site by deep deconvolutional network

Sirajul Salekin, Jianqiu Michelle Zhang, Yufei Huang

This paper introduces DeepSNR, a deep learning model that predicts transcription factor binding sites at single base pair resolution using DNA sequences and outperforms motif search methods.

29 citations

DNA methylationChIP-seq

𝕏 PostBluesky