Author

Smaragda Dimitrakopoulou

National Technical University of Athens

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Jens LagergreniD· 1 shared Leonidas G. AlexopoulosiD· 1 shared Michael NeidliniD· 1 shared Mohammadreza Mohaghegh NeyshabouriiD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 2 mutual co-author links

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1 shared paperBioinformatics

Jens LagergrenORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintDec 23, 2022

C-ToMExO: Learning Cancer Progression Dynamics from Clonal Composition of Tumors

Mohammadreza Mohaghegh Neyshabouri, Smaragda Dimitrakopoulou, Jens Lagergren

The paper introduces a method to infer cancer progression models from clone-level data, showing improved robustness and scalability using a novel MCMC algorithm.

DOI 10.1101/2022.12.23.521788

humanbulk RNA-seq

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Systems BiologyScientific ReportsPeer-reviewedOct 23, 2019

Multi-tissue network analysis for drug prioritization in knee osteoarthritis

Michael Neidlin, Smaragda Dimitrakopoulou, Leonidas G. Alexopoulos

This paper develops a computational method using WGCNA to identify gene modules in multi-tissue OA data and prioritizes compounds for drug discovery.

21 citations

humanbulk RNA-seq

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