Author

T. Blein

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Plant Biology· 7 Immunology· 1

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Research Focus:cell type annotation· 7 Organism:Arabidopsis· 6 Approach:statistical model· 5 Assay:bulk RNA-seq· 4 Research Focus:differential expression· 4 Research Focus:gene regulatory network inference· 3 Assay:ChIP-seq· 2 Approach:deep learning· 2

Frequent Co-Authors

M. Crespi· 7 shared A. Christ· 2 shared C. Sorin· 2 shared E. Ferrante· 2 shared F. Ariel· 2 shared L. Lucero· 2 shared N. Gaggion· 2 shared T. Roule· 2 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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7 shared papersPlant Biology

M. Crespi

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8 papers

Recent·Most cited

The transcription factor NF-YA10 determines the area explored by Arabidopsis thaliana roots through direct regulation of LAZY and TAC genes

A. Barrios, N. Gaggion, N. Mansilla, L. Lucero, T. Blein, C. Sorin, E. Ferrante, M. Crespi, F. D. Ariel

This study identifies NF-YA10 as a transcription factor regulating lateral root gravitropism and root system architecture in Arabidopsis thaliana by modulating LAZY and TAC gene expression.

bioRxiv · Apr 26, 2023 · PreprintPlant Biology

Regulatory annotation identifies KAN1, MYB44 and PIF4 as regulators of Arabidopsis lincRNAs expressed in root

L. Liu, M. Heidecker, T. Depuydt, N. Manosalva Perez, M. Crespi, T. Blein, K. Vandepoele

The paper constructs a gene regulatory network in Arabidopsis to identify TFs regulating root-specific lincRNAs, revealing key regulators and their associated lincRNAs linked to root development.

bioRxiv · Sep 9, 2022 · PreprintPlant Biology

Synergistic action of the Arabidopsis spliceosome components PRP39a and SmD1 in promoting post-transcriptional transgene silencing

H. Vaucheret, J. Bazin, E. Elvira-Matelot, T. Blein, V. Jauvion, N. Bouteiller, J. Cao, M. Crespi

This study shows PRP39a and SmD1 synergistically promote S-PTGS by limiting degradation of transgene aberrant RNAs, facilitating their export to the cytoplasm for dsRNA formation.

bioRxiv · Aug 10, 2022 · PreprintPlant Biology

Sequence-unrelated long noncoding RNAs converged to modulate the activity of conserved epigenetic machineries across kingdoms

C. Fonouni-Farde, A. Christ, T. Blein, J. S. Ramirez-Prado, M. F. Legascue, D. Latrasse, M. Moison, L. Lucero, L. Ferrero, D. Gonzalez, M. Benhamed, L. Quadrana, M. Crespi, F. Ariel

The paper shows that sequence-unrelated lncRNAs modulate epigenetic machineries across kingdoms by interacting with conserved proteins to regulate gene expression.

bioRxiv · Feb 26, 2021 · PreprintPlant Biology

CD28 costimulatory domain protects against tonic signaling-induced functional impairment in CAR-Tregs

B. Lamarthee, A. Marchal, S. Charbonnier, T. Blein, E. Martin, K. Vogt, M. Titeux, M. Delville, H. Vincon, E. Six, N. Pallet, D. Anglicheau, C. Legendre, J.-L. Taupin, B. Sawitzki, , J. Zuber

This study compares CD28 and 4-1BB costimulatory domains in CAR-Tregs, finding CD28 better preserves function and survival under tonic signaling.

bioRxiv · Nov 19, 2020 · PreprintImmunology

ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

N. Gaggion, F. Ariel, V. Daric, E. Lambert, S. Legendre, T. Roule, A. Camoirano, D. H. Milone, M. Crespi, T. Blein, E. Ferrante

ChronoRoot uses deep segmentation networks and 3D-printed hardware to enable high-temporal-resolution root phenotyping, revealing new time-related root growth parameters.

bioRxiv · Oct 27, 2020Plant Biology

Two ecotype-related long non-coding RNAs in the environmental control of root growth

T. Blein, C. Balzergue, T. Roule, M. Gabriel, L. Scalisi, C. Sorin, A. Christ, E. Delannoy, M.-L. Martin-Magniette, L. Nussaume, C. Hartmann, D. Gautheret, T. Desnos, M. Crespi

The paper identifies two ecotype-related long non-coding RNAs that regulate primary root growth in response to phosphate starvation in Arabidopsis.

bioRxiv · Mar 16, 2019Plant Biology

Role of MPK4 in pathogen-associated molecular pattern-triggered alternative splicing in Arabidopsis

B. Jeremie, K. G. Mariappan, T. Blein, R. Volz, M. Crespi, H. Hirt

The paper identifies 506 PAMP-induced differentially alternatively spliced genes in Arabidopsis, showing MPK4 regulates splicing factors and immunity-related genes in PAMP-triggered immunity.

bioRxiv · Jan 4, 2019Plant Biology