Author

T. Roule

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:plant (other)· 2 Organism:Arabidopsis· 1 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Research Focus:chromatin & epigenetic regulation· 1 Approach:comparative / phylogenetic analysis· 1 Approach:deep learning· 1

Frequent Co-Authors

M. Crespi· 2 shared T. Blein· 2 shared A. Camoirano· 1 shared A. Christ· 1 shared A. P. Marand· 1 shared C. Balzergue· 1 shared C. Hartmann· 1 shared C. Sorin· 1 shared

Activity by Year

2019-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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2 shared papersPlant Biology

M. Crespi

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Author profile →

3 papers

Recent·Most cited

Evolution of plant cell-type-specific cis-regulatory elements

H. Yan, J. P. Mendieta, X. Zhang, A. P. Marand, Y. Liang, Z. Luo, M. A. A. Minow, H. Jang, X. Li, T. Roule, D. Wagner, X. Tu, Y. Wang, D. Jiang, S. Zhong, , R. J. Schmitz

The paper constructs a single-cell chromatin accessibility atlas in rice and compares it across grass species to study the evolution of cell-type-specific cis-regulatory elements.

bioRxiv · Jan 8, 2024 · PreprintPlant Biology

ChronoRoot: High-throughput phenotyping by deep segmentation networks reveals novel temporal parameters of plant root system architecture

N. Gaggion, F. Ariel, V. Daric, E. Lambert, S. Legendre, T. Roule, A. Camoirano, D. H. Milone, M. Crespi, T. Blein, E. Ferrante

ChronoRoot uses deep segmentation networks and 3D-printed hardware to enable high-temporal-resolution root phenotyping, revealing new time-related root growth parameters.

bioRxiv · Oct 27, 2020Plant Biology

Two ecotype-related long non-coding RNAs in the environmental control of root growth

T. Blein, C. Balzergue, T. Roule, M. Gabriel, L. Scalisi, C. Sorin, A. Christ, E. Delannoy, M.-L. Martin-Magniette, L. Nussaume, C. Hartmann, D. Gautheret, T. Desnos, M. Crespi

The paper identifies two ecotype-related long non-coding RNAs that regulate primary root growth in response to phosphate starvation in Arabidopsis.

bioRxiv · Mar 16, 2019Plant Biology