Author

T. Hanada

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 3 Cell Biology· 1 Evolutionary Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Approach:experimental assay· 3 Organism:bacteria (other)· 2 Research Focus:cell type annotation· 2 Approach:statistical model· 2 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

S. Kawabata· 3 shared Y. Hirose· 3 shared M. Nakata· 2 shared M. Yamaguchi· 2 shared T. Sumitomo· 2 shared A. V. Sastry· 1 shared B. O. Palsson· 1 shared C. Nakagawa· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersMicrobiology

S. Kawabata

Mutual co-authors in cluster

Author profile →

5 papers

Recent·Most cited

Biallelic variants in LARS1 induce steatosis in developing zebrafish liver via enhanced autophagy

M. Inoue, W. A. Sebastian, S. Sonoda, H. Miyahara, N. Shimizu, H. Shiraishi, M. Maeda, K. Yanagi, T. Kaname, R. Hanada, T. Hanada, K. Ihara

This study identifies biallelic LARS1 variants as a cause of infantile liver failure by showing they induce steatosis via enhanced autophagy in zebrafish.

bioRxiv · Sep 21, 2023 · PreprintCell Biology

Elucidation of independently modulated genes in Streptococcus pyogenes reveals carbon sources that control its expression of hemolytic toxins

Y. Hirose, S. Poudel, A. V. Sastry, R. Szubin, D. C. Zielinski, H. G. Lim, N. D. Menon, H. Bergsten, S. Uchiyama, T. Hanada, S. Kawabata, B. O. Palsson, V. Nizet

The paper identifies carbon sources that regulate hemolytic toxin expression in Streptococcus pyogenes using transcriptome-wide independent component analysis.

bioRxiv · Aug 4, 2022Microbiology

Gene expression profiles of chemosensory genes of termite soldier and worker antennae

R. H. Suzuki, T. Hanada, Y. Hayashi, S. Shigenobu, K. Maekawa, M. K. Hojo

The paper compares gene expression in worker and soldier antennae of termites to identify chemosensory genes involved in caste-specific social behaviors.

bioRxiv · Jul 25, 2022Evolutionary Biology

Genetic characterization of Streptococcus pyogenes emm 89 strains isolated in Japan from 2011 to 2019

Y. Hirose, M. Yamaguchi, N. Takemoto, T. Miyoshi-Akiyama, T. Sumitomo, M. Nakata, T. Ikebe, T. Hanada, T. Yamaguchi, R. Kawahara, R. Okuno, H. Otsuka, Y. Matsumoto, Y. Terashima, Y. Kazawa, , S. Kawabata

The paper characterizes emm89 Streptococcus pyogenes strains from Japan, finding most belong to clade 3 and carry STSS-associated genes and SNPs.

bioRxiv · Apr 14, 2020Microbiology

Transcriptomic profiling of Streptococcus pyogenes M1T1 strain in a mouse model of necrotizing fasciitis

Y. Hirose, M. Yamaguchi, D. Okuzaki, D. Motooka, H. Hamamoto, T. Hanada, T. Sumitomo, M. Nakata, S. Kawabata

This study identifies S. pyogenes gene-expression changes in a mouse necrotizing fasciitis model, revealing upregulation of virulence factors and downregulation of oxidative-stress response genes.

bioRxiv · Apr 15, 2019 · PreprintMicrobiology