Author

Tatiana Julien

The University of Texas at Austin

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Systems Biology· 1

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Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

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Alyssa M. EkdahliD· 1 shared Judith F. Kribelbauer-SwietekiD· 1 shared Lydia FreddolinoiD· 1 shared Lydia M. ContrerasiD· 1 shared Saeed TavazoieiD· 1 shared Sahana Suraj· 1 shared

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1 shared paperSystems Biology

Alyssa M. EkdahlORCID

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1 paper

Recent·Most cited

Systems BiologyNucleic Acids ResearchPeer-reviewedJul 8, 2025

Multiscale regulation of nutrient stress responses in Escherichia coli from chromatin structure to small regulatory RNAs

Alyssa M. Ekdahl, Tatiana Julien, Sahana Suraj…·Lydia M. Contreras

The paper identifies nutrient stress response mechanisms in E. coli by integrating chromatin structure and small regulatory RNA data, revealing novel transcription factor-sRNA interactions.

2 citations

E. coliChIP-seq

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