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Thomas J. Goss

University of Michigan

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Systems Biology· 1

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Assay:ChIP-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:E. coli· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:protein structure prediction· 1

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Haley M. AmemiyaiD· 1 shared Peter L. FreddolinoiD· 1 shared Saeed TavazoieiD· 1 shared

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Systems BiologyPLoS BiologyPeer-reviewedJun 25, 2021

Dynamic landscape of protein occupancy across the Escherichia coli chromosome

Peter L. Freddolino, Haley M. Amemiya, Thomas J. Goss, Saeed Tavazoie

The paper uses IPOD-HR to globally map protein-DNA interactions in E. coli, revealing dynamic transcription factor occupancy and stable nucleoid factor domains, and develops computational models for transcription factor specificity.

38 citations

E. coliChIP-seq

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