Author

Todd Riley

University of Massachusetts Boston

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Biology Disciplines

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Bioinformatics· 1

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Assay:ChIP-seq· 1 Research Focus:gene regulatory network inference· 1 Approach:statistical model· 1

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Kourosh ZarringhalamiD· 1 shared Saman FarahmandiD· 1 shared

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2019-2019 · peak 1/yr

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BioinformaticsJournal of Biomedical InformaticsPeer-reviewedDec 16, 2019

ModEx: A text mining system for extracting mode of regulation of Transcription Factor-gene regulatory interaction

Saman Farahmand, Todd Riley, Kourosh Zarringhalam

ModEx extracts mode of regulation (activation/repression) for TF-gene interactions from ChIP-Seq data using text mining and achieves high F-scores on curated datasets.

12 citations

ChIP-seqstatistical model

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