Author

U. Ray

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Cancer Biology· 1 Immunology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:cell type annotation· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1

Frequent Co-Authors

A. K. Banerjee· 2 shared P. P. Tripathi· 2 shared A. K. Srivastava· 1 shared A. Schulze-Selting· 1 shared C. Ruschil· 1 shared D. J. H. F. Knapp· 1 shared D. M. Altmann· 1 shared Deutsche COVID-19 OMICS Initiative (DeCOI)· 1 shared

Activity by Year

2020-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersMicrobiology

A. K. Banerjee

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Comparative multi-OMICS single-cell atlas of five COVID-19 (rAdVV and mRNA) vaccines describe unique and distinct mechanisms of action

Y. Singh, A. Schulze-Selting, G. Gabernet, U. Ray, R. Bajaj, M. Ali, M. Loitz, V. Hammer, E. Buena-Atienza, C. Ruschil, J. Huebner, M. Kowarik, M. salker, N. Casadei, S. Nahnsen, , O. Riess

This study compares the mechanisms of action of five COVID-19 vaccines using multi-omics single-cell data, revealing distinct immune responses and cell-type-specific effects.

bioRxiv · Sep 12, 2022 · PreprintImmunology

Barcoded Competitive Clone-Initiating Cell (BC-CIC) Analysis Reveals Differences in Ovarian Cancer Cell Genotype and Niche Specific Clonal Fitness During Growth and Metastasis In Vivo

S. M. M. Aalam, X. Tang, J. Song, J. N. Bakkum-Gamez, M. E. Sherman, U. Ray, V. Shridhar, K. R. Kalari, D. J. H. F. Knapp, N. Kannan

This paper introduces a clonal tracking system using DNA barcoding and computational analysis to study metastatic clone fitness and genotype effects in ovarian cancer.

bioRxiv · Apr 8, 2021Cancer Biology

A virus that has gone viral: Amino acid mutation in S protein of Indian isolate of Coronavirus COVID-19 might impact receptor binding and thus infectivity

P. Saha, A. K. Banerjee, P. P. Tripathi, A. K. Srivastava, U. Ray

The paper analyzes amino acid mutations in the S protein of Indian SARS-CoV-2 isolates, identifying a mutation at position 407 that may affect receptor binding and infectivity.

Bioscience Reports · May 15, 2020Peer-reviewedMicrobiology

Two mutations P/L and Y/C in SARS-CoV-2 helicase domain exist together and influence helicase RNA binding

F. Begum, A. K. Banerjee, P. P. Tripathi, U. RAY

The paper identifies two mutations in SARS-CoV-2 helicase, P504L and Y541C, which have opposing effects on RNA binding affinity and are co-existing in some isolates.

bioRxiv · May 14, 2020 · PreprintMicrobiology