Author

Yoshie Masuda

Kyoto University

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Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Assay:CRISPR screen· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1

Frequent Co-Authors

Atsushi MochizukiiD· 1 shared Fumi Wagai· 1 shared Hisanori KiryuiD· 1 shared Kosuke YusaiD· 1 shared Masato IshikawaiD· 1 shared Mototsugu EirakuiD· 1 shared Nobuko Taniyama· 1 shared Seiichi Sugino· 1 shared

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2023-2023 · peak 1/yr

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Atsushi MochizukiORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintAug 23, 2023

Inference of gene regulatory networks using time-series single-cell RNA-seq data with CRISPR perturbations

Masato Ishikawa, Seiichi Sugino, Yoshie Masuda…·Atsushi Mochizuki

This paper introduces RENGE, a method for inferring gene regulatory networks from time-series scCRISPR data, which outperforms existing methods and produces GRNs consistent with known databases.

DOI 10.1101/2023.08.23.554254

humanscRNA-seq

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