Author

Z. Ramsak

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 6

Signature Assays, Organisms & Methods

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Approach:experimental assay· 5 Organism:plant (other)· 5 Assay:bulk RNA-seq· 4 Research Focus:cell type annotation· 4 Research Focus:database / resource· 2 Research Focus:gene regulatory network inference· 2 Research Focus:host-pathogen & immune response· 2 Approach:statistical model· 2

Frequent Co-Authors

K. Gruden· 6 shared M. Petek· 5 shared M. Kriznik· 3 shared M. Zagorscak· 3 shared C. Bleker· 2 shared S. Baebler· 2 shared A. Bittner· 1 shared A. Coll· 1 shared

Activity by Year

2017-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 28 mutual co-author links

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6 shared papersPlant Biology

K. Gruden

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6 papers

Recent·Most cited

Ethylene signaling is essential for mycorrhiza-induced resistance against chewing herbivores in tomato

J. Lidoy, J. Rivero, Z. Ramsak, M. Petek, M. Kriznik, V. Flors, J. A. Lopez-Raez, A. Martinez-Medina, K. Gruden, M. J. Pozo

This study shows that ethylene signaling is essential for mycorrhiza-induced resistance in tomato against chewing herbivores, revealing hormone crosstalk as central to this defense mechanism.

bioRxiv · Jun 13, 2024Plant Biology

Evidence based Unification of poTato gene models with UniTato collaborative genome browser

M. Zagorscak, J. Zrimec, C. Bleker, N. Nolte, Z. Ramsak, K. Gruden, M. Petek

The paper unifies potato gene models using an Apollo web server and provides a collaborative genome browser for annotation updates.

bioRxiv · Dec 7, 2023Plant Biology

Stress Knowledge Map: A knowledge graph resource for systems biology analysis of plant stress responses

C. Bleker, Z. Ramsak, A. Bittner, V. Podpecan, M. Zagorscak, B. Wurzinger, S. Baebler, M. Petek, M. Kriznik, A. van Dieren, J. Gruber, L. Afjehi-Sadat, A. Zupanic, M. Teige, U. C. Vothknecht, K. Gruden

The paper introduces Stress Knowledge Map, a resource with two knowledge graphs for plant stress responses, and demonstrates its use in hypothesis generation and analysis.

bioRxiv · Nov 28, 2023Plant Biology

Major orchestration of shikimate, early phenylpropanoid and stilbenoid pathways by Subgroup 2 R2R3-MYBs in grapevine

L. Orduna, M. Li, D. Navarro-Paya, C. Zhang, A. Santiago, P. Romero, Z. Ramsak, G. Magon, J. Höll, P. Merz, K. Gruden, A. Vannozzi, D. Cantu, J. Bogs, D. C. J. Wong, , J. T. Matus

This study identifies Subgroup 2 R2R3-MYBs as key regulators of the stilbenoid pathway in grapevine by integrating DAP-Seq and co-expression networks.

bioRxiv · Dec 31, 2020 · PreprintPlant Biology

Cultivar-specific transcriptome and pan-transcriptome reconstruction of tetraploid potato

M. Petek, M. Zagorscak, Z. Ramsak, S. Sanders, S. Tomaz, E. Tseng, M. Zouine, A. Coll, K. Gruden

The paper merges and curates gene models and generates cultivar-specific and pan-transcriptomes for tetraploid potato to explore genetic diversity.

bioRxiv · Apr 18, 2020Plant Biology

Salicylic acid perturbs sRNA-gibberellin regulatory network in immune response of potato to Potato virus Y infection

M. Kriznik, M. Petek, D. Dobnik, Z. Ramsak, S. Baebler, S. Pollmann, J. Kreuze, J. Zel, K. Gruden

The paper identifies a salicylic acid-dependent sRNA-gibberellin regulatory network in potato's immune response to Potato virus Y infection, linking sRNA responses to disease severity and developmental signaling.

bioRxiv · Oct 12, 2017Plant Biology