Author

Harshraj Shinde

University of KentuckyORCID 0000-0001-5062-1575Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Assay:DNA methylation· 2 Research Focus:gene regulatory network inference· 2 Organism:virus· 2 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Organism:plant (other)· 1

Frequent Co-Authors

Carlos Marcelino Rodriguez LopeziD· 2 shared Ambika DudhateiD· 1 shared Atul Sathe· 1 shared Everard J. EdwardsiD· 1 shared Jia W. TaniD· 1 shared Kiflu TesfamicaeliD· 1 shared Lakshay AnandiD· 1 shared Neha PaserkariD· 1 shared

Activity by Year

2023-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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2 shared papersPlant Biology

Carlos Marcelino Rodriguez LopezORCID

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3 papers

Recent·Most cited

Plant BiologybioRxivPreprintApr 6, 2024

Transcriptome Analysis Reveals Long-Term Somatic Memory of Stress in The Woody Perennial Crop, Grapevine Vitis Vinifera cv. Cabernet Sauvignon

Jia W. Tan, Kiflu Tesfamicael, Yikang Hu…·Carlos Marcelino Rodriguez Lopez

This study investigates stress memory in grapevines using transcriptome and methylome sequencing, finding epigenetic changes and a classification model for stress memory genes.

4 citations

viruswhole-genome sequencing

𝕏 PostBluesky

Plant BiologybioRxivPreprintOct 21, 2023

Multi-Omics Insights into Grapevine Dormancy-Budburst Transition: Gene Expression, miRNA Regulation, and DNA Methylation

Harshraj Shinde, Tajbir Raihan, Lakshay Anand…·Carlos Marcelino Rodriguez Lopez

This study uses multi-omics approaches to analyze grapevine dormancy-to-budburst transition, identifying gene expression changes, miRNA regulation, and DNA methylation patterns.

1 citation

virusbulk RNA-seq

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GenomicsPlantsPeer-reviewedMar 22, 2023

Gene coexpression analysis identifies genes associated with chlorophyll content and relative water content in pearl millet

Harshraj Shinde, Ambika Dudhate, Atul Sathe…·Ulhas Sopanrao Kadam

9 citations

plant (other)bulk RNA-seq

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