Muzaffer Arıkan

PLATE provides a global resource of food metaplasmidomes, offering curated catalogs and annotations for studying plasmid diversity and function in food ecosystems.

MetaPepticon automates the discovery of anticancer peptides from microbial genomes and metagenomes, identifying 79,587 novel candidates including 13,149 high-confidence, non-toxic peptides.

This study investigates microbiome signatures in the oral-gut-brain axis and their role in Parkinson's disease and cognitive decline.

This study uses machine learning to analyze gut microbiota data from Parkinson's disease, RBD, and healthy controls, finding weak to moderate accuracy in distinguishing disease groups but not between PD and RBD.

gNOMO2 is an updated pipeline for analyzing microbiome multi-omics data, offering enhanced features for integration and visualization across various omics types.