Author

Madeline Krieger

Oregon Health & Science UniversityORCID 0000-0001-5209-3905Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Assay:bulk RNA-seq· 1 Approach:experimental assay· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Elizabeth A. Palmer· 2 shared Jens KrethiD· 2 shared Justin L. MerrittiD· 2 shared Anna Yoo· 1 shared Dongseok ChoiiD· 1 shared Galip Gürkan YardımcıiD· 1 shared Jeffrey S. McLeaniD· 1 shared Kristopher A. KernsiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Elizabeth A. Palmer

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2 papers

Recent·Most cited

BioinformaticsMicrobiology SpectrumPeer-reviewedSep 14, 2026

Paired oral clinical specimens reveal the underlying ecology supporting the emergence of inflammophilic microbiome communities

Madeline Krieger, Kristopher A. Kerns, Elizabeth A. Palmer…·Justin L. Merritt

The paper investigates how host inflammation reshapes oral microbiome communities by analyzing paired clinical specimens and identifying metabolic shifts associated with inflammatory states.

1 citation

humanbulk RNA-seq

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MicrobiologyCell Host & MicrobePeer-reviewedMar 12, 2024

The prevalence of Fusobacterium nucleatum subspecies in the oral cavity stratifies by local health status

Madeline Krieger, Yasser M. AbdelRahman, Dongseok Choi…·Justin L. Merritt

This study investigates the prevalence of Fusobacterium nucleatum subspecies in the oral cavity and finds that their distribution varies with local health status.

65 citationstop 1%

humanmetagenomics

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