Ruben Shrestha

This study maps protein-protein interactions in Arabidopsis using cross-linking mass spectrometry, identifying thousands of interactions across subcellular compartments and structural complexes.

This study provides large-scale proteomic evidence that alternative splicing isoforms are translated in plants, showing their impact on protein abundance and plant growth.

The paper uses proteomic analysis to identify substrate proteins regulated by O-fucosylation and O-GlcNAcylation in Arabidopsis, revealing their roles in protein homeostasis and stress responses.

This study identifies ERC1 as a protein that forms biomolecular condensates to recruit ATG8 and NBR1, promoting autophagosome formation and enhancing heat tolerance in Arabidopsis.

The paper maps the Arabidopsis alternative splicing machinery and identifies O-glycosylation regulators affecting splicing through ACINUS-dependent and -independent pathways.

The paper improves TurboID-mediated proximity labeling by optimizing enrichment and analysis methods, identifying 160 SPY interactors including 100 novel ones.

The paper identifies 436 O-GlcNAcylated proteins in Arabidopsis, revealing their involvement in diverse cellular processes and crosstalk with O-fucosylation.

The paper identifies RMT2 as a chloroplast methyltransferase homolog involved in photosystem I biogenesis in Chlamydomonas reinhardtii through a high-throughput O2 sensitivity screen.

This study identifies AtACINUS as an O-GlcNAcylated and O-fucosylated protein that regulates transcription and alternative splicing of reproductive regulators in Arabidopsis.