Jan Taubenheim

This study shows that PPI-associated microbiome changes cause systemic metabolic and transcriptional responses, affecting metabolism and inflammation in multiple tissues.

This study examines gut microbiome diversity and structure across different lifestyles in Thailand, finding variations in microbial composition and associations with lifestyle factors.

This study shows that specific metabolites can shift Hydra's microbiome composition and function, leading to ammonia toxicity and disease-like phenotypes.

The paper introduces Virtual Colon, a spatiotemporal metabolic model of the colon that simulates host-microbial interactions and visualizes them over time and space.

The paper integrates multi-omics data from mice to identify molecular features linked to aging-related cognitive decline, highlighting systemic inflammation and microbiome-driven gut-brain axis dysfunction.

This study uses metabolic modeling to uncover host-microbiome metabolic dysregulation in IBD, identifying key pathways and potential therapeutic interventions.

This study uses multi-omics and metabolic modeling in mice to show that aging reduces host-microbiome metabolic interactions, affecting key host pathways involved in intestinal barrier function and homeostasis.

The paper examines the relationship between HK2 expression and inflammation severity in IBD patients using bulk transcriptome data and confirms findings at the cellular and protein levels.

The paper uses metabolic modeling to predict precision prebiotics that specifically enhance the abundance of a beneficial microbiome species in C. elegans.

The paper identifies two peptides, Eco1 and Eco2, regulated by bacteria and temperature that modulate beta-catenin signaling and pattern formation in Hydra.