Giacomo Oliveira

This paper introduces APC-ms, a platform that expands rare tumor-antigen-specific T cells from peripheral blood, achieving higher enrichment and functional properties compared to conventional methods.

VDJdive and ECLIPSE resolve ambiguous clonotypes in scTCR-seq by improving chain pairing and clone size estimation, enhancing clonal tracking across conditions.

This study identifies immune cell types and biomarkers in irMyocarditis using single-cell RNA sequencing and TCR analysis across heart, blood, and tumor tissues.

STAPLER is a transformer model that predicts TCR-pMHC specificity by learning from TCR and peptide sequences, outperforming existing methods in antigen recognition prediction.