Gaetan J. A. Thilliez

This study identifies a reversible genetic mechanism in Salmonella Typhimurium that confers phage resistance by deleting the wzy locus, enabling recovery after phage predation.

This study identifies host susceptibility and resistance factors for Salmonella enterica infected by bacteriophages SPLA1a and SPLA5b, showing that their combination reduces phage resistance emergence.

The paper analyzes the population structure and evolution of Salmonella enterica serotype Typhi in Zimbabwe before a typhoid vaccine campaign, identifying dominant resistant genotypes and their AMR mechanisms.

This study analyzes genomic diversity and antimicrobial resistance in Escherichia coli isolates from non-human primates in the Gambia, identifying novel sequence types and potential human pathogen exchange.

The paper uses single-cell genomics to analyze bacterial population structures in antibiotic stress experiments, revealing sub-populations and resistance development not detectable with bulk sequencing.

This study constructs a phylogenetic tree of 131 S. Typhimurium strains to reveal population structure and adaptation to domesticated and wild animal hosts.