Olivier Restif

This study compiles an open database of paramyxovirus studies in Old World fruit bats, identifies sampling biases, and finds evidence of host-switching among pteropodids.

The paper develops a framework to analyze multivariate beta-lactam resistance in Streptococcus pneumoniae using MIC data from 3,628 isolates, revealing genetic mutations and lineage-specific resistance profiles.

This paper introduces a Bayesian multilevel model to estimate prevalence dynamics from pooled and individual wildlife samples, accounting for dilution effects and false negatives.

The paper shows that periodic increases in viral load during high prevalence periods in bats correlate with spillover events, suggesting viral load is a better predictor of transmission risk than prevalence alone.

HAM-ART improves metagenomics by linking AMR genes to host chromosomes and plasmids, showing differences in AMR gene distribution between pig farms with varying antibiotic use.