Author

John Anthony Hadish

Washington State UniversityORCID 0000-0001-9669-2467Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Approach:machine learning (classical)· 2 Organism:Arabidopsis· 1 Research Focus:benchmarking· 1 Organism:plant (other)· 1

Frequent Co-Authors

Loren A. HonaasiD· 2 shared Stephen Patrick FickliniD· 2 shared

Activity by Year

2023-2024 · peak 1/yr

Co-Author Collaboration Network

2 top collaborators · 1 mutual co-author link

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersSystems Biology

Loren A. HonaasORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Systems BiologybioRxivPreprintDec 9, 2024

Predicting plant traits using large conglomerate RNA-seq datasets

John Anthony Hadish, Loren A. Honaas, Stephen Patrick Ficklin

The paper predicts plant phenotypic traits using RNA-seq datasets and finds that few hundred samples suffice for tissue classification but thousands are needed for age prediction.

DOI 10.1101/2024.12.09.627626

plant (other)bulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintDec 5, 2023

Predicting Phenotypic Traits Using a Massive RNA-seq Dataset

John Anthony Hadish, Loren A. Honaas, Stephen Patrick Ficklin

The paper uses a large RNA-seq dataset to determine the sample size and normalization needed for accurate phenotypic trait prediction.

2 citations

Arabidopsisbulk RNA-seq

𝕏 PostBluesky