Ashutosh Srivastava

The paper maps structural coverage of Arabidopsis thaliana developmental proteins using experimental data and AlphaFold predictions, finding higher structural coverage in plants than in humans.

The paper identifies Igf2bp2 as a target of REV-ERBβ repression in skeletal muscle using co-expression network analysis and functional experiments.

The paper develops a mathematical model of the plant circadian clock and identifies key regulatory mechanisms and essential interactions through computational analysis.

This study compares intrinsic dynamics of PAS domains in bHLH-PAS transcription factor complexes using ENMs and MD simulations, revealing conserved self-coupled motions and context-specific directly coupled motions.

This study uses molecular dynamics simulations to analyze REV-ERBβ ligand-binding domain dynamics and antagonist effects on NCoR peptide binding, informing rational drug design.

This study reveals the structural basis of RALF peptide binding to FERONIA receptor kinase, explaining how compatible and incompatible peptides regulate pollen tube penetration during Brassicaceae pollination.

This study reveals the structural basis of competitive binding between RALF23/33 and PCP-B in Brassicaceae pollination using modeling and simulations.

This study identifies a boronic acid derivative that inhibits LexA-mediated SOS response in Mycobacterium tuberculosis, reducing mutation rates and potentially combating antimicrobial resistance.