Author

Shingo Miyauchi

Institut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementORCID 0000-0002-0620-5547Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1 Organism:plant (other)· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Igor V. GrigorieviD· 2 shared Vivian NgiD· 2 shared Alan KuoiD· 1 shared Alga ZuccaroiD· 1 shared Anna LipzeniD· 1 shared Annegret KohleriD· 1 shared Asmamaw Bidru EndeshawiD· 1 shared Bang FengiD· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersMicrobiology

Igor V. GrigorievORCID

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2 papers

Recent·Most cited

MicrobiologyNew PhytologistPeer-reviewedSep 3, 2024

Time-resolved transcriptomics reveal a mechanism of host niche defense: beneficial root endophytes deploy a host-protective antimicrobial GH18-CBM5 chitinase

Ruben Eichfeld, Lisa K. Mahdi, Concetta De Quattro…·Alga Zuccaro

This study uses time-resolved transcriptomics to identify a GH18-CBM5 chitinase in Sebacinales fungi that protects plants against the pathogen Bipolaris sorokiniana.

36 citationstop 2%

plant (other)bulk RNA-seq

𝕏 PostBluesky

GenomicsNew PhytologistPeer-reviewedNov 12, 2021

Evolutionary innovations through gain and loss of genes in the ectomycorrhizal Boletales

Gang Wu, Shingo Miyauchi, Emmanuelle Morin…·Francis M Martin

This study identifies genomic traits of ectomycorrhizal transitions in Boletales by comparing gene repertoires and reconstructing gene duplication/loss histories.

55 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky