Author
Shahil P. Pema
Washington University in St. LouisORCID 0000-0002-0741-8501Unclaimed ORCID profile · follow to get notified of new preprints
Biology Disciplines
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2018-2024 · peak 1/yrCo-Author Collaboration Network
10 top collaborators · 45 mutual co-author links4 papers
Recent·Most cited
- GenomicsbioRxivPreprint
Evolution of the open-access CIViC knowledgebase is driven by the needsof the cancer variant interpretation community
Kilannin Krysiak, Arpad M. Danos, Susanna Kiwala…·Malachi Griffith
The paper describes the evolution of the CIViC knowledgebase to meet the needs of the cancer variant interpretation community by expanding its functionality and data types.
DOI 10.1101/2021.06.13.448171 - BioinformaticsGenome MedicinePeer-reviewed
The CIViC knowledge model and standard operating procedures for curation and clinical interpretation of variants in cancer
Arpad M. Danos, Kilannin Krysiak, Erica Kay Barnell…·Obi L. Griffith
The paper describes the CIViC knowledge model and curation procedures for systematically organizing and interpreting cancer-related genetic variants.
27 citations - GeneticsGenetics in MedicinePeer-reviewed
Standard operating procedure for somatic variant refinement of tumor sequencing data
Erica Kay Barnell, Peter Ronning, Katie Marie Campbell…·Obi L. Griffith
This paper establishes a standard operating procedure for manual refinement of somatic variants in tumor sequencing data to improve consistency and reproducibility.
94 citationstop 5%