Xiaofan Jin

The paper develops a method to detect invertons in gut microbiome metagenomic data and finds associations between inverton dynamics and intestinal colonization and surface adhesion.

The paper introduces StrainPGC and MIDAS v3 to accurately estimate intraspecific microbial gene content variation in metagenomic data, outperforming existing methods and revealing functional diversity in gut microbiomes.

The paper investigates how meiotic chromatin organization influences recombination activity by analyzing 3D chromosomal structure and recombination rates at PRDM9 hotspots.

This paper applies delay differential equations to model biological network motifs, finding simplifications and insights into dynamics with delays.

This paper introduces Biofilm Lithography, a method to create high-resolution structured biofilms using optogenetic adhesin expression, achieving spatial resolution down to 25 micrometers.