Author

Wenchao Gu

Chiba UniversityORCID 0000-0002-1505-9887Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Wenchao Gu2 papers · Department of Artificial Intelligence Medicine, Graduate School of Medicine, Chiba University, Chiba, Japan;

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Research Focus:cell-cell communication· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:deconvolution· 1

Frequent Co-Authors

Dongqiang ZengiD· 2 shared Gaofeng WangiD· 1 shared Gaofeng WangiD· 1 shared Guangchuang YuiD· 1 shared Guangda Rong· 1 shared Haonan Huang· 1 shared Haruna TakahashiiD· 1 shared Kaichi OzoneiD· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 15 mutual co-author links

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2 shared papersBioinformatics

Dongqiang ZengORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 22, 2026

✦ In-depth digest

IOBRpy enables agentic multi-omics decoding of anti-tumor immunity

Haonan Huang, Xin Li, Lu Liu…·Dongqiang Zeng

Python toolkit chains RNA-seq quantification, six-method tumour microenvironment (TME) profiling, SpecHLA typing and TRUST4 repertoire analysis with AI agents; TME outputs match R implementations (Spearman 0.986 to ~1.0).

DOI 10.64898/2026.07.17.739055

humanbulk RNA-seq

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Cancer BiologyCell Reports MethodsPeer-reviewedDec 1, 2024

IOBR2: Multidimensional Decoding Tumor Microenvironment for Immuno-Oncology Research

Dongqiang Zeng, Yiran Fang, Wenjun Qiu…·Wangjun Liao

IOBR2 is a tool for analyzing tumor microenvironment using multi-omics data, offering modules for preprocessing, estimation, interaction analysis, and visualization.

122 citationstop 1%

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Molecular BiologybioRxivPreprintAug 25, 2024

Effectiveness of Exercise Intervention in Preventing Active Arthritis Exacerbation in an SKG Mouse Model of Rheumatoid Arthritis

Kaichi Ozone, Tatsunori Kumagai, Kohei Arakawa…·Naohiko Kanemura

This study shows that low-intensity exercise reduces arthritis severity and inflammation in SKG mice with rheumatoid arthritis.

DOI 10.1101/2024.08.25.609287

mousebulk RNA-seq

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