Delphine Lallias

This study identifies novel SNPs associated with VHSV resistance in rainbow trout and shows lrp1 modulates inflammatory response during infection.

This study uses structural bioinformatics and AlphaFold to reconstruct a salmonid alphavirus virion, revealing a distinctive helical feature in the E2 envelope protein and its implications for virulence.

This study characterizes interindividual DNA methylation variability in rainbow trout using whole-genome bisulfite sequencing, identifying variable methylation regions enriched at gene regulatory elements and showing intraindividual correlation in some loci.

This paper discusses the adoption of Nextflow and nf-core frameworks to standardize bioinformatics pipelines, improving collaboration and interoperability across research communities.

This study links behavior traits with acute hyperthermia and hypoxia resistance in rainbow trout isogenic lines, finding behavioral variables as potential predictors for these traits.

The paper assesses correlations between feed efficiency (FE) and feeding behavior in rainbow trout using isogenic lines and indirect measurements.

The paper evaluates RRBS as a method for analyzing DNA methylation in rainbow trout spermatozoa, finding it effective for genome-wide scanning but with limitations in coverage and data processing choices.

This study identifies the genetic architecture of acute hyperthermia resistance in rainbow trout and shows it is polygenic with no major genetic correlations to production traits.

The paper develops a high-density 665 K SNP array for rainbow trout and demonstrates its utility in detecting linkage disequilibrium at shorter genomic distances.